Fisher-Wright model with deterministic seed bank and selection.

نویسندگان

  • Bendix Koopmann
  • Johannes Müller
  • Aurélien Tellier
  • Daniel Živković
چکیده

Seed banks are common characteristics to many plant species, which allow storage of genetic diversity in the soil as dormant seeds for various periods of time. We investigate an above-ground population following a Fisher-Wright model with selection coupled with a deterministic seed bank assuming the length of the seed bank is kept constant and the number of seeds is large. To assess the combined impact of seed banks and selection on genetic diversity, we derive a general diffusion model. The applied techniques outline a path of approximating a stochastic delay differential equation by an appropriately rescaled stochastic differential equation. We compute the equilibrium solution of the site-frequency spectrum and derive the times to fixation of an allele with and without selection. Finally, it is demonstrated that seed banks enhance the effect of selection onto the site-frequency spectrum while slowing down the time until the mutation-selection equilibrium is reached.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

The Fisher-Wright model with deterministic seed bank and selection

Seed banks are a common characteristics to many plant species, 1 which allow storage of genetic diversity in the soil as dormant seeds for various 2 periods of time. We investigate an above-ground population following a Fisher3 Wright model with selection coupled with a deterministic seed bank assuming 4 the length of the seed bank is kept constant and the number of seeds is large. 5 To assess ...

متن کامل

Genealogy of a Wright Fisher model with strong seed bank component

We investigate the behaviour of the genealogy of a Wright-Fisher population model under the influence of a strong seed-bank effect. More precisely, we consider a simple seed-bank age distribution with two atoms, leading to either classical or long genealogical jumps (the latter modeling the effect of seed-dormancy). We assume that the length of these long jumps scales like a power N of the orig...

متن کامل

A new coalescent for seed-bank models

We identify a new natural coalescent structure, the seed-bank coalescent, which describes the gene genealogy of populations under the influence of a strong seedbank effect, where ‘dormant forms’ of individuals (such as seeds or spores) may jump a significant number of generations before joining the ‘active’ population. Mathematically, our seed-bank coalescent appears as scaling limit in a Wrigh...

متن کامل

The ancestral process of long term seed bank models

We present a new model for seed banks, where direct ancestors of individuals may have lived in the near as well as the very far past. The classical Wright-Fisher model, as well as a seed bank model with bounded age distribution considered by Kaj, Krone and Lascoux (2001) are special cases of our model. We discern three parameter regimes of the seed bank age distribution, which lead to substanti...

متن کامل

The Ancestral Process of Long-Range Seed Bank Models

We present a new model for seed banks, where direct ancestors of individuals may have lived in the near as well as the very far past. The classical Wright-Fisher model, as well as a seed bank model with bounded age distribution considered by Kaj, Krone and Lascoux (2001) are special cases of our model. We discern three parameter regimes of the seed bank age distribution, which lead to substanti...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Theoretical population biology

دوره 114  شماره 

صفحات  -

تاریخ انتشار 2017